Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme490712g00001 ACCGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGTCAGACCCGTGAACATGCTCTCCTTGCTATCACTCTTGGTGTGAAGCAAATGATCTGCTGCTGCAACAAGATGGATGCCACTACTCCTAAATACTCCAAGGGTAGGTATGATGAAATTGTGAAGGAAGTTTCATCCTATTTGAAGAAG 183 0.4426 TGGFEAGISKDGQTREHALLAITLGVKQMICCCNKMDATTPKYSKGRYDEIVKEVSSYLKK 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme490712g00001 61 Gene3D - 1 61 IPR027417 -
Trme490712g00001 61 Pfam Elongation factor Tu GTP binding domain 11 59 IPR000795 GO:0003924|GO:0005525
Trme490712g00001 61 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 60 IPR027417 -
Trme490712g00001 61 PANTHER TRANSLATION FACTOR 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme490712g00001 Trme-Chr490712 1 278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme490712g00001 1 61 Eukaryotic Initiation Factors Gene Family AT1G07930 95.082 3.64e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme490712g00001 K03231 - aew:130761268 126.331