Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49069g00001 ATGGTGACTCGTGGTGATACGATAACAAAATGTCTTGATCCAGATTCTGCAGCTCTAAGTAGAGATGCATTGGCTAAAATAGTTTATTCAAGACTTTTTGACTGGATTGTGGACAAGATTAACAACTCTATTGGGCAAGATCCAAATTCAAAGAACTTAATTGGCGTTCTAGATATATACGGATTTGAGAGTTTCAAGACAAACAGTTTCGAGCAATTTTGTATCAACTTGACAAATGAGAAGTTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATCGAGTTCGTTGATAATCAAGATGTTCTTGATCTTATTGAGAAGGTGCAACTCACCCTT 381 0.3622 MVTRGDTITKCLDPDSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKVQLTL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49069g00001 127 Pfam Myosin head (motor domain) 2 123 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme49069g00001 127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 123 IPR027417 -
Trme49069g00001 127 Gene3D Myosin VI head, motor domain, U50 subdomain 12 43 - -
Trme49069g00001 127 Gene3D Kinesin motor domain 44 64 IPR036961 -
Trme49069g00001 127 Gene3D - 65 122 - -
Trme49069g00001 127 PANTHER MYOSIN 1 124 - -
Trme49069g00001 127 PRINTS Myosin heavy chain signature 106 127 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme49069g00001 127 PRINTS Myosin heavy chain signature 53 81 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme49069g00001 127 SMART MYSc_2a 1 127 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme49069g00001 127 ProSiteProfiles Myosin motor domain profile. 1 127 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49069g00001 Trme-Chr49069 52 965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49069g00001 1 122 Myosins gene family AT1G04600 90.984 7.18e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49069g00001 K10357 - ccaj:114917037 241.891