Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme490428g00001 ATGCTTCCAAGTAATAAATCAAAAGCTCGTACTAGTGGTAAAGGACGAGGTAAAAAACAAAACGGGAAAAAGGAAGTGATTGATTTGAGAACACTACTTATTCTTTGTGCACAAGCTGTTGCAGCAGACGATCATAAAAGTGCACACGAGTTGCTAAAGCAGATCAGGCAGCATTCGAATATTTTCGGAGATGGAAATCAGCGGTTGGCTCATATTTTTGCTGATGGCCTTGAGGCGCGTTTGGCTGGTACAGGAAGCCA 260 0.4269 MLPSNKSKARTSGKGRGKKQNGKKEVIDLRTLLILCAQAVAADDHKSAHELLKQIRQHSNIFGDGNQRLAHIFADGLEARLAGTGS 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme490428g00001 86 ProSiteProfiles GRAS family profile. 20 86 IPR005202 -
Trme490428g00001 86 MobiDBLite consensus disorder prediction 1 23 - -
Trme490428g00001 86 Pfam GRAS domain family 29 83 IPR005202 -
Trme490428g00001 86 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 84 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme490428g00001 20 86 GRAS Transcription Factor Family AT2G37650 80.597 2.39e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme490428g00001 GRAS 1.4e-12 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme490428g00001 - - ccaj:109816616 142.895