Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49022g00001 ATGTGGATGCTAAACGAGCTAAGTTCGCCTTATGGCGACACAGAGCAAAAACTTTCATCTTATTTTCTTCAAGCTTTGTTTAGTCGAATGAACGATGCAGGTGATAGAACCTACAAAACATTAACATTTGCGTCGGAGAAAACATGTTCGTTTGATTCAACTAGGAAGATGTTGTTGAAGTTTCAAGAAGTTAGTCCATGGACAACATTTGGACATGTGGCATCAAATGGAGCTATTTTAGAAGCATTAGAAGGTAACCCTAAACTTCACATAATTGATATCAGCAACACTTATTGCACTCAGTGGCCAACGCTTCTCGAAGCATTGGCCACTCGCTCTGATGATACACCTCATCTTCGTTTAACCACTGTGGTCACCGCAATCAGCGGTGGCTCAGTTCAAAAAGTCATGAAGGAAATTGGTACAAGGATGGAGAAATTCGCGAGGCTAATGGGTGTGCCGTTTAAATTCAAAATCATTTTC 483 0.4079 MWMLNELSSPYGDTEQKLSSYFLQALFSRMNDAGDRTYKTLTFASEKTCSFDSTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGTRMEKFARLMGVPFKFKIIF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49022g00001 161 ProSiteProfiles GRAS family profile. 1 161 IPR005202 -
Trme49022g00001 161 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 159 IPR005202 -
Trme49022g00001 161 Pfam GRAS domain family 2 160 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49022g00001 Trme-Chr49022 1 483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49022g00001 1 160 GRAS Transcription Factor Family AT4G37650 73.494 1.57e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme49022g00001 GRAS 3.8e-47 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49022g00001 - - vvo:131607159 320.472