Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48964g00001 GGTGTATGTGGATGTGATAGGTTCAAAAGTGGTTCAATCGGTGATGTTATTAAAACAATAGTGAAAAAAGATGGATACAGAGGGCTCATGCGAGGATGGGTTCCAAGGATGCTCTTTCATGCTCCTGCAGCCGCTATTTGCTGGTCTACATATGAAGCTGGAAAATCCTTTTTCCAAGATTACAATGAGCAGAAAGATACSGGAACCATCACCTAA 216 0.4167 GVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQKDTGTIT 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48964g00001 71 Pfam Mitochondrial carrier protein 10 61 IPR018108 -
Trme48964g00001 71 SUPERFAMILY Mitochondrial carrier 11 62 IPR023395 -
Trme48964g00001 71 Gene3D Mitochondrial carrier domain 5 71 IPR023395 -
Trme48964g00001 71 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 57 IPR018108 -
Trme48964g00001 71 PANTHER MITOFERRIN-1-RELATED 3 60 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48964g00001 1 68 Chloroplast and Mitochondria Gene Families AT1G07030 76.471 2.09e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48964g00001 K15113 - gmx:100802640 149.443