Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48662g00001 TGTGGAAGTCGTGAATGGTTTGGTGAAGGTAGCAAAATAATCATCACGACAACAGATAGGCATCTACTTAAGAAGCACGGAGTTGACCATATATATAGAGTGAAAGAACTGGACGAAAGTGAATCGCTTCAGCTATTTAATTGTCATGTATTTGGCCGAACAACAAGTCCTGGGGAAGATTTTGGCAAACTTTCTAGACAGCTAGTTGCTTATTCTAGGGGATTACCTCTTGCTCTTAAATCCCTCGGGGAGTTTTTGCGTGGAATGGGAATACTTGAGTGGAAAGGTGCATTGAGGAGTCTCGAAAGATTTTCCATTCCAGTTCCACAACTACTAAAAGCTCTAGAAAAGAGTCTTAGTGATTTGAGTTACAAGGAGAAACAAACATTCCTTGATATAGCATGCTTCTTTATCAGGATGGACCAAAATGATGTACTCCAAACATTAAATAGGTCAACACAATGTGCAGATCTTCAAATAAGCCTCCTTGAAGACAAGAGCCTTGTAACCATTGATGAGAATAACAAGCTTCAAATGCATGTTCTGCTACAAGCCACGGCAAAAGATATCATTAAGAGGGAATCAAGTAATAAGACTAATCAGGTGAGTGCCAAAGGTGTACGACGTGTTCTTGAGTTTCAGAGGGGAAGACAGTCGTGCAAAGTTCGTGTCACATCTCTATTCCTCTCTTCAAAATGCGGGAATTTATGCTTTCAGAGACGATGA 726 0.4036 CGSREWFGEGSKIIITTTDRHLLKKHGVDHIYRVKELDESESLQLFNCHVFGRTTSPGEDFGKLSRQLVAYSRGLPLALKSLGEFLRGMGILEWKGALRSLERFSIPVPQLLKALEKSLSDLSYKEKQTFLDIACFFIRMDQNDVLQTLNRSTQCADLQISLLEDKSLVTIDENNKLQMHVLLQATAKDIIKRESSNKTNQVSAKGVRRVLEFQRGRQSCKVRVTSLFLSSKCGNLCFQRR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48662g00001 241 Gene3D - 36 126 IPR042197 -
Trme48662g00001 241 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 199 IPR044974 GO:0006952
Trme48662g00001 241 SUPERFAMILY "Winged helix" DNA-binding domain 111 195 IPR036390 -
Trme48662g00001 241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 133 IPR027417 -
Trme48662g00001 241 Pfam NB-ARC domain 9 107 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48662g00001 Trme-Chr48662 2 964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48662g00001 2 203 WRKY Transcription Factor Family AT4G12020 34.975 5.52e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48662g00001 - - mtr:11411578 276.944