Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme485853g00001 ATGGTGGATGAGAACACCATTTGTGTTGCTGCTATTCTTGGTTCCACGTTAAACGGAGAGTTTGAAGATGTCAAGCGCTTAAACGATCTCCTAGTAGCAAAAAATACCGAAACTGG 116 0.4224 MVDENTICVAAILGSTLNGEFEDVKRLNDLLVAKNTETG 39
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme485853g00001 39 SUPERFAMILY PLP-dependent transferases 1 37 IPR015424 -
Trme485853g00001 39 PANTHER GLUTAMATE DECARBOXYLASE 1 39 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme485853g00001 Trme-Chr485853 37 152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme485853g00001 1 39 Calmodulin-binding Proteins AT1G65960 94.872 4.43e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme485853g00001 K01580 - han:110909160 75.8701