Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48562g00001 ATGGTACATGTGGATGATGTGGCTAGAGCACATATATATCTACTTGAGAATCCTGTTCCAGGAGGGAGATATAATTGTTCACCATTCATTGTATCTATTGAAGAAATGTCTCAACTTCTTTCAGCCAAATATCCAGAATATCAAATACTAACAGTAGATGAGTTGAAGGAAATTAAAGGTGCAAGGTTACCAGATTTGAACACGAAGAAACTCGTGGACGCTGGTTTTGAGTTTAAGTACAGTGTCGATGATATGTTCGACGATGCGATTCAATGTTGCAAGGAAAAAGGCTATCTCTAA 300 0.3767 MVHVDDVARAHIYLLENPVPGGRYNCSPFIVSIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFEFKYSVDDMFDDAIQCCKEKGYL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48562g00001 99 Gene3D - 1 99 - -
Trme48562g00001 99 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 97 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48562g00001 Trme-Chr48562 493 909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48562g00001 1 99 Monolignol Biosynthesis Gene Families AT2G02400 31.313 1.99e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48562g00001 - K13265 ag:AAB41550 196.052