Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48529g00001 ATTATGGAAAAAGAAAGAATAGCAATGGAGGAAAGGGATCCAGCTATCTCCCAAGCTAAGAAACGGAAAAAGATTATTGCGAGCCTCCCTAAGCTCTTTAACATGATTCACATGATGTTTCATTCAATAAACCGTTCTGTTCTCACAAAAGAGGAGCTGATGAGCAAGATAATTTCAAGCCACCGTGATATCGTTGATAGAAGTGAAGTTGAAGAACAATTCCATTTGTTGTTAGAATTAGTTCCTGAATGGATTTCTGAGAAGTTGGCCTCCAGTGGAGATATGCTAGTCTCCGTAAATAAAATGTTGAACCCTGAATCCTTAAGAGCATCACTTGAAGAAGCAAAATGA 351 0.3818 IMEKERIAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVLTKEELMSKIISSHRDIVDRSEVEEQFHLLLELVPEWISEKLASSGDMLVSVNKMLNPESLRASLEEAK 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48529g00001 116 Pfam DNA replication factor Cdt1 C-terminal domain 1 88 IPR032054 -
Trme48529g00001 116 PANTHER DNA REPLICATION FACTOR CDT1 1 116 IPR045173 GO:0003677|GO:0030174|GO:0071163
Trme48529g00001 116 Gene3D - 16 116 IPR038090 -
Trme48529g00001 116 CDD Cdt1_c 1 113 IPR032054 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48529g00001 1 114 Core DNA Replication Machinery Family AT2G31270 60.526 3.45e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48529g00001 K10727 - qsa:O6P43_006919 177.178