Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme484g00001 ATGGCGGCAGTGGCTTCCATTGCAGCTGGCGTGCAATTTGGGTGGGCGTTGCAGCTCTCCCTGCTCACGCCATATGTGCAGCTGCTGGGAGTTCCACACCAATGGGCCGCCAACATTTGGCTCTGCGGCCCAATATCCGGCATGGTGATACAGCCACTTGTCGGATATTACAGTGACCGCTGTCAGTCACATTATGGTCGCCGCCGCCCATTCATTTTTTTCGGCGTCATAGCAGTGGCTATTGTCGCCGTACTCATCAGCTCTGCTGCTGATTTAGGCCATGCATTAGGCGATGGCCTCGACAAAAAAACAAAGCCACATGCTATTGTTATTTTTGTTTCCGGCTTCTGGGTCCTGGATGTAGCCAACAACTTGCTCCAGGGACCATGCCGGGCCTTTATCGGTGATCTTGCAGCCGGTGATCACCGCCGAATGAGAACAGGCAACAGTTTGTTCTCGTTCTTCATGGCAGTCGGTAATATTCTTGGGTATGCTGCTGGCTCCTATGAGAAGCTCCACAGTAAGTTTTCTTTCATGGAAACTGAAGCTTGCGACCCCTTTTGTACAAATTTGAAAATCTGTTTTTTCTTCTCCGTCCTCCTCCTTGTTGTACTTTCAACTGTGGCTCTACTTTACGTAGAAGATATCCCAGTTGTATCACCGGCGTCGGAATCACAAGTGTCTTGCTTTGGTGAGTTTCTTGGTGCATTCCATGGACTACCATTTCGGATGTGGATGCTGATGGTAGTAACGGCGATCAACTGGGTTGCATGGTTCCCTTTTATTCTCTTCGACACGGATTGGATGGGTCAAGAAGTATACGGTGGGAAACCAGGAGATGATGCGTACTTTCATGGAGTGCGAGCTGGAGCATTGGGATTGATGATCAATGCAGCAACTGTACTGATCACCAAGGCAGCCGAGCATGAACGCCATGTCAGTGGCAACCGTGGCGCACTGTCTACAGGAGTTAAGGCCGCCGCATTCATCTTCTTCGCCGTCCTTGGCATCCGGTCCCCCTTGCGTGTCCCATTTGCTTTGGCATCAATTTATTCCAATGCTACAGGAGCCGGGCAAGGTTTATACTTGGGAGTCCTTAACATTTCAATTGTTGCTCCACAGTATCTTCATNNNNNNTNNNNNNNNNNGTGGGATAAACTGTTTGGTGGCGGCAATGTACCTGCATTTGCGGTTGGTGCTGTGGCGGCACTAACCAGTGCTGTGTTGGCAATTGCTCTTTTGCCCACTCCGACACCGGAGGATACGGCCAATGCATCGATTGGAGGTGGTTTCCATTGA 1299 0.4981 MAAVASIAAGVQFGWALQLSLLTPYVQLLGVPHQWAANIWLCGPISGMVIQPLVGYYSDRCQSHYGRRRPFIFFGVIAVAIVAVLISSAADLGHALGDGLDKKTKPHAIVIFVSGFWVLDVANNLLQGPCRAFIGDLAAGDHRRMRTGNSLFSFFMAVGNILGYAAGSYEKLHSKFSFMETEACDPFCTNLKICFFFSVLLLVVLSTVALLYVEDIPVVSPASESQVSCFGEFLGAFHGLPFRMWMLMVVTAINWVAWFPFILFDTDWMGQEVYGGKPGDDAYFHGVRAGALGLMINAATVLITKAAEHERHVSGNRGALSTGVKAAAFIFFAVLGIRSPLRVPFALASIYSNATGAGQGLYLGVLNISIVAPQYLHXXXXXXWDKLFGGGNVPAFAVGAVAALTSAVLAIALLPTPTPEDTANASIGGGFH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme484g00001 432 Gene3D MFS general substrate transporter like domains 1 219 IPR036259 -
Trme484g00001 432 SUPERFAMILY MFS general substrate transporter 4 417 IPR036259 -
Trme484g00001 432 CDD MFS_SLC45_SUC 3 411 - -
Trme484g00001 432 PANTHER SUGAR TRANSPORTER 2 413 - -
Trme484g00001 432 Pfam MFS/sugar transport protein 9 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme484g00001 Trme-Chr484 648 2701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme484g00001 3 432 Sucrose Transporter Gene Family AT1G71890 52.917 2.55e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme484g00001 K15378 - gmx:100782007 535.413