Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48482g00001 GGATATGACAAAGAAGAGAAAGCAGCAAGGGCTTATGATTTAGCTGCACTAAAGTATTGGGGGACATCCACCACTACAAATTTTCCAATCAGTAACTATGAGAAGGAAGTTGAAGATATGAAGCACATGACTAGACAAGAATTTGTTGCCGCCATAAGAAGGTAA 165 0.3939 GYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEDMKHMTRQEFVAAIRR 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48482g00001 54 ProSiteProfiles AP2/ERF domain profile. 1 29 IPR001471 GO:0003700|GO:0006355
Trme48482g00001 54 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 54 - -
Trme48482g00001 54 SUPERFAMILY DNA-binding domain 2 31 IPR016177 GO:0003677
Trme48482g00001 54 Gene3D AP2/ERF domain 1 32 IPR036955 GO:0003700|GO:0006355
Trme48482g00001 54 SMART rav1_2 1 35 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48482g00001 1 54 AP2-EREBP Transcription Factor Family AT5G17430 87.037 3.04e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48482g00001 K09285 - sly:101252050 112.464