Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48457g00001 ATGGAGTTTCTGGTGGCTGTGCTGAAATTGGATGAAGCAGCCTTGCAAAAAGTATTCCTCAAGTCCCTCGAGAATTACATAAATTGGTGCAACTACCTATGCATTACGCCTGTTTGGAGCAGTTTGGAGGCTGTCAGTAAAGAGAAGAAGTTGCTGTATGTTTCTTTATACCTACTAATATGGGGTGAAGCTTCAAATGTCAGGTTTCTACCGGAATGCCTGTGCTACATATTCCATCATTTTAGTTGCATTAATTTGATTGATAATATTGGTCTGAACTTGTTGAGTGGTGGTCCTAATGCAAACAAACAATGA 315 0.3968 MEFLVAVLKLDEAALQKVFLKSLENYINWCNYLCITPVWSSLEAVSKEKKLLYVSLYLLIWGEASNVRFLPECLCYIFHHFSCINLIDNIGLNLLSGGPNANKQ 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48457g00001 104 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 12 81 - -
Trme48457g00001 104 SMART FKS1_dom1_2 48 97 IPR026899 -
Trme48457g00001 104 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 50 82 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48457g00001 Trme-Chr48457 14 872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48457g00001 9 80 Cell Wall Biosynthesis AT3G07160 76.389 6.87e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48457g00001 K11000 - qsa:O6P43_023747 146.362