Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48417g00001 ATGGTGCAGTTTCATGGTGGTGGTTGGGTGAGTGGGAGTAATGATTCGGTTGCGAATGATTTTTTTTGTAGGAGGATTGCGAAACTGTGTGATTCGGTTGTTGTAGCGGTTGGTTACCGGCTTGCGCCGGAGAGTAGGTATCCGGCGGCTTTCGAGGATGGATTTAAGGTTTTGAATTGGTTGGCGAAGCAAGCGAATTTGGCGGAGTGTAGTAAGTCGTTGGGGATTAAGAAATGTGATGGTGGTCATAAGCATATTGTTGATTCTTTTGGTGCTTCTATGGTTGAACCTTGGTTGGCTGCTCATGGAAATTTRTCAAGGTTGTAA 327 0.4526 MVQFHGGGWVSGSNDSVANDFFCRRIAKLCDSVVVAVGYRLAPESRYPAAFEDGFKVLNWLAKQANLAECSKSLGIKKCDGGHKHIVDSFGASMVEPWLAAHGNLSRL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48417g00001 108 Pfam alpha/beta hydrolase fold 1 73 IPR013094 GO:0016787
Trme48417g00001 108 PANTHER ARYLACETAMIDE DEACETYLASE 1 70 - -
Trme48417g00001 108 Gene3D alpha/beta hydrolase 1 91 IPR029058 -
Trme48417g00001 108 SUPERFAMILY alpha/beta-Hydrolases 1 65 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48417g00001 Trme-Chr48417 612 938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48417g00001 1 107 Carbohydrate Esterase AT3G27320 72.807 6.65e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48417g00001 - - psat:127123740 215.698