Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme483708g00001 ATGTTTCCTCCAGTCTTTGGTGGATTCAGAAAAGCAGCAACAGATATTGAATATGGTGGATACATTATACCTAAAGGGTGGCAGATCTTTTGGGTTACATCAATGACTCACATGGACAACAATATTTTCCCAGAACCATCAAAGTTTGATCCTAGTAGATTTGAAAACCAA 171 0.3743 MFPPVFGGFRKAATDIEYGGYIIPKGWQIFWVTSMTHMDNNIFPEPSKFDPSRFENQ 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme483708g00001 57 Gene3D Cytochrome P450 1 57 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme483708g00001 57 SUPERFAMILY Cytochrome P450 1 56 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme483708g00001 57 PANTHER CYTOCHROME P450 26 1 54 - -
Trme483708g00001 57 Pfam Cytochrome P450 3 56 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme483708g00001 57 PRINTS B-class P450 signature 38 53 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme483708g00001 57 PRINTS B-class P450 signature 10 37 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme483708g00001 Trme-Chr483708 1 256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme483708g00001 9 55 Cytochrome P450 AT5G45340 53.191 5.58e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme483708g00001 - - lja:Lj2g3v3149370.3 120.168