Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48333g00001 TTTGACTTGTCTGGTTTGTTTGAGGAGAAAGAAAAAAAGACGGAAATACGGTTTACGTCTAACAAGCCTGCTTCAATCATCATCTCCAAATTTGAAGAAATTTGCAAGTGTATCGGGCTAAAACTGAAGAAAAAAGACGGAGGTTTGTTCAAGTTAGAAGGTTTGAAGGAAGGAAGAAAAGGACATTTGGGTATCGACGCAGAGATTTTCGAGATCACGCCAATGTTCCATTTAGTTGAGTTGAAAAAGTCGAATGGAGACACGTTGGAGTACCAAAAGCTGTTGAAAGATAATGTTAGGCCTTCACTTAAGGACATTGTTTGGTCATGGCAAGGAGAACAACCACAGCAATTGCAACATGGAATGGTGCAGAAAGAGGAACARCCATCTTYCTAA 396 0.3965 FDLSGLFEEKEKKTEIRFTSNKPASIIISKFEEICKCIGLKLKKKDGGLFKLEGLKEGRKGHLGIDAEIFEITPMFHLVELKKSNGDTLEYQKLLKDNVRPSLKDIVWSWQGEQPQQLQHGMVQKEEQPSX 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48333g00001 131 Gene3D Kinase associated domain 1, KA1 1 109 - -
Trme48333g00001 131 Pfam NAF domain 1 44 IPR004041 GO:0007165
Trme48333g00001 131 CDD CIPK_C 1 104 - -
Trme48333g00001 131 FunFam Non-specific serine/threonine protein kinase 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48333g00001 Trme-Chr48333 59 454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48333g00001 1 114 CBL-interacting serine-threonine protein kinases AT5G58380 64.912 7.12e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48333g00001 K07198 - gmx:100815651 192.586