Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme483102g00001 AAGACTGTTGAGAGTTGTCTTACTGATTCAAAGATGGAGAAAAGTAGTGTAGATGATATTGTTCTTGTCGGTGGCTCGTCTAGGATTCCCAAAGTGCAGGAACTATTGAGTGATTTCTTCAATGGGAAGGATTTGTGCAAGAGCATCAACCCTGATGAGACTGTTGCCTGTGGTGCAGCTGTCCTGGCTGCTGTATTGTGTGAAGACATTAAGAATCTTCCAAAATTTGTATTGCGAGATGTTACCCCTTTGTCACTTGGTATCAAAACGTTTGGAGATATCATG 285 0.4175 KTVESCLTDSKMEKSSVDDIVLVGGSSRIPKVQELLSDFFNGKDLCKSINPDETVACGAAVLAAVLCEDIKNLPKFVLRDVTPLSLGIKTFGDIM 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme483102g00001 95 Pfam Hsp70 protein 2 95 IPR013126 GO:0005524|GO:0140662
Trme483102g00001 95 ProSitePatterns Heat shock hsp70 proteins family signature 3. 20 34 IPR018181 -
Trme483102g00001 95 Gene3D - 2 49 - -
Trme483102g00001 95 SUPERFAMILY Actin-like ATPase domain 2 66 IPR043129 -
Trme483102g00001 95 Gene3D - 50 64 - -
Trme483102g00001 95 PRINTS 70kDa heat shock protein signature 49 69 - -
Trme483102g00001 95 PRINTS 70kDa heat shock protein signature 75 94 - -
Trme483102g00001 95 PRINTS 70kDa heat shock protein signature 17 33 - -
Trme483102g00001 95 PANTHER HEAT SHOCK PROTEIN 70KDA 2 95 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme483102g00001 Trme-Chr483102 1 285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme483102g00001 3 95 Calmodulin-binding Proteins AT3G12580 67.021 6.30e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme483102g00001 K03283 - gmx:100804476 133.65