Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48290g00001 ATGTGCAAGGAAGAAATGAAGGTCCTGATGTACATGTTTTGCAAATTAGTACTAGATGCATGTGGTTTCGGCGCTACTAGTGGGATACAAATACTTGAAGATAAAGCTCTTGTAACTATTTCTAGCAATAGAATTCAAATGCATGACTTGCTACAGAAAATGGCTTTGGATATAGTTCGAAATGACCAAGGAAAGCGTAGCCGACTGAGGGATATTGAAGATGTTCGTGATTTACTTAAAAGTAACAAGGGGGCTGATGTTGTTGAAGGCATGCTATTTGATTTGTCTCAAAAAAGAATAAGTTTAAATGTCAAACCTGAAACGTTCAATATGATGGTTGATCTTAGATTTCTTAAATTATATGTCCCCTTGGGTATGAAGAGATTGACCACCTTGTCTCATTCTGATCAAGGCATTATGCAATTTTCTGATAAACTTAGATACCTTGAGTCAGTGAGTGGAATGGGTACCCTTTGA 477 0.369 MCKEEMKVLMYMFCKLVLDACGFGATSGIQILEDKALVTISSNRIQMHDLLQKMALDIVRNDQGKRSRLRDIEDVRDLLKSNKGADVVEGMLFDLSQKRISLNVKPETFNMMVDLRFLKLYVPLGMKRLTTLSHSDQGIMQFSDKLRYLESVSGMGTL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48290g00001 158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 150 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48290g00001 Trme-Chr48290 384 948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48290g00001 16 151 WRKY Transcription Factor Family AT4G12020 32.624 1.25e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48290g00001 - - mtr:11434506 158.303