Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme48286g00001 | ATGGCAGGGAGTGACATATTTGCAGAGATTATAGATGGTGATGTTTTCAATTACTACTCAGATGGACAGTGGAACAAATCATCATCTGGAAAATATGTTCCTATCATCAATCCAACCACTAGAAAAACTCATTTCAAGGTTCAAGCTTGTACACAGGAAGAAGTTAACAAGGTGATAGAATCAGCAAAAACTGCTCAAAAATTATGGGCTAAAACTCCACTTTGGAAAAGAGCTGAGTTGCTTCATAAGGCTGCTGCAATATTGAAGGAACACAAAGCACCTATTGCTGAGTG | 293 | 0.3823 | MAGSDIFAEIIDGDVFNYYSDGQWNKSSSGKYVPIINPTTRKTHFKVQACTQEEVNKVIESAKTAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAE | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme48286g00001 | 97 | PANTHER | ALDEHYDE DEHYDROGENASE | 3 | 97 | - | - | |
| Trme48286g00001 | 97 | SUPERFAMILY | ALDH-like | 16 | 97 | IPR016161 | GO:0016491 | |
| Trme48286g00001 | 97 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 10 | 97 | IPR016162 | GO:0016491 | |
| Trme48286g00001 | 97 | Pfam | Aldehyde dehydrogenase family | 24 | 96 | IPR015590 | GO:0016491 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme48286g00001 | 1 | 97 | Aldehyde Dehydrogenase Gene Family | AT2G24270 | 74.227 | 7.06e-48 | 157 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme48286g00001 | K00131 | - | mof:131150546 | 181.03 |