Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48271g00001 ATGATGTATTATAGGAAGGCTCTCATGCTTCAGACCTATTTGGAGAGGACTACAGCTGGTGTTGATTTGGAGGCTGGACTTGGTTTTGATGAAGTATCTGATACACGTGGCTTTGATTTATCCCCTGAAGCACGTGCTCAGGCGGATCTGAAATTCACTTATGTTGTGACATGCCAAATTTATGGTAAGCAGAAAGAGGAGCAAAAGCCTGAGGCTGTTGATATTGCTTTACTTATGCAAAGAAATGAAGCTCTTCGTGTTGCTTTCATTGACGTTGTTGAAACTTTAAGAGATGGAAAAGTGAACACCGAATACTACTCAAAGCTTGTGAAAGCTGATATTAATGGGAAAGACAAG 357 0.4062 MMYYRKALMLQTYLERTTAGVDLEAGLGFDEVSDTRGFDLSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAVDIALLMQRNEALRVAFIDVVETLRDGKVNTEYYSKLVKADINGKDK 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48271g00001 119 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 113 - -
Trme48271g00001 119 Pfam 1,3-beta-glucan synthase component 1 114 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48271g00001 Trme-Chr48271 393 946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48271g00001 1 119 Cell Wall Biosynthesis AT3G07160 73.950 2.69e-54 180