Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48263g00001 GACGTCGGTTGCGACCGATCTTCTTTGGCAGATGAAATATTTGATTACTTGACAAACACCGAAGAAAATTTTGACGAGACTAGCCAAGAGAACAAAGATGATAACATCAATAAAAAGAAGACCCAAATTCAACCGTCTCCGAGTGGACTTGAACTCTGTCCCTTGAGGCCAACAGACCAAACTCTTACAGCTGATCAGGCACCTCWTGAAGAGAAGWGTCAAATTCAATTATTTGAYGTGGTTGAAGAAATCATCAAAGATATTCAAGATCAAGGCAAAGGTAATAAAAGAGCAAGTTGCATAGTTGATGACGAGGAAGAGGAAAACACAAGAGAGAATTGGAAAGGTATAATTAGGAGAAAGAGGTGTGTTGAAGAGGATGATGATGAAATGAGGAAGTTCAATCCAAGAGATCCAAATTTTTTACCTTTGGTTCCTGAAAAAGAAAAGGAAAAAGTTGATTTGAGGCATCAAATGATGGATGAGAGAAAGAATGCAGAAGATTGGATGGTTGATTGTGCACTAAGACAAGTTGTTAACAAGCTTGCTCCTGCTAGGAAGAAGAAGGTTGCATTGCTAGTTGAAGCATTTGAAACTGTTATACCTAAATGTGAATCTCATTTGAGAAACAAATCAGGGTTTGCTCATGCTAGACACATTCAAGCTTGTAGCTGA 675 0.3837 DVGCDRSSLADEIFDYLTNTEENFDETSQENKDDNINKKKTQIQPSPSGLELCPLRPTDQTLTADQAPXEEKXQIQLFDVVEEIIKDIQDQGKGNKRASCIVDDEEEENTRENWKGIIRRKRCVEEDDDEMRKFNPRDPNFLPLVPEKEKEKVDLRHQMMDERKNAEDWMVDCALRQVVNKLAPARKKKVALLVEAFETVIPKCESHLRNKSGFAHARHIQACS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48263g00001 224 Pfam Plant calmodulin-binding domain 97 202 IPR012417 GO:0005516
Trme48263g00001 224 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 21 202 IPR044681 GO:0005516
Trme48263g00001 224 MobiDBLite consensus disorder prediction 25 39 - -
Trme48263g00001 224 MobiDBLite consensus disorder prediction 20 57 - -
Trme48263g00001 224 SMART CaM_binding_2 90 202 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48263g00001 Trme-Chr48263 1 675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48263g00001 105 223 Calmodulin-binding Proteins AT2G38800 54.167 1.30e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48263g00001 - - tpra:123913208 427.943