Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4821g00001 ATGGGCAAAGTAATAGTCCAGCAAGAATCACTTGAAGAGCCTAGAAAACGTAGCAGACTGTGGTCCCATAAAGATATAGTTGAAGTTTTGGAAGAAAATTTGGGAACATCTCAAATTGAGATTATTTATTGGGATATCCCATTATATGAAGAAGTGGTAGAATGGAAAGGAGATGAATTCAAGAAGATGGAAAACCTCAAAACACTAATTATTAAAAATAGTCTCTTTTCCAAAGGTCCTGATCATCTTCCTAATAGTTTAAGAGTATTAGATTGGCCTGGTTATCCTTCACAACATATACCATCAGATTTTTGCCCAAGGAAACTTTCCATATGCAAGTTACCAGCGAGTTACCTTACAATATTTGAGTTTCACAGCTCATTGAAGGCAGACGTTCGTGAATTTGAGAGAGTTAAATTTAAACAACAGTCAAGATTTGAGACAGATACACAATGTTGCAGCAAACTTAACAGTTTTCCACCTATGAAGTTGACCTCACTTGAACAACTGGAGCTTTCATTTTGTGAAAGTCTCAAGTGGTTTCCAGAGATATTAGGACAAATGAAGAATACAAAAATAATTGTTTTGAAGGGAACTGTCATTGAAGAGTTTCCATTTTCATTTCAAAATCTCACCGGACTTCATACCTTAGGAATATGGGGTAGTGGAATGCTTAGATTACCAG 685 0.3577 MGKVIVQQESLEEPRKRSRLWSHKDIVEVLEENLGTSQIEIIYWDIPLYEEVVEWKGDEFKKMENLKTLIIKNSLFSKGPDHLPNSLRVLDWPGYPSQHIPSDFCPRKLSICKLPASYLTIFEFHSSLKADVREFERVKFKQQSRFETDTQCCSKLNSFPPMKLTSLEQLELSFCESLKWFPEILGQMKNTKIIVLKGTVIEEFPFSFQNLTGLHTLGIWGSGMLRLP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4821g00001 228 SUPERFAMILY L domain-like 54 221 - -
Trme4821g00001 228 Gene3D Ribonuclease Inhibitor 22 228 IPR032675 -
Trme4821g00001 228 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 225 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4821g00001 Trme-Chr4821 492 1738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4821g00001 2 226 WRKY Transcription Factor Family AT4G12020 28.986 8.81e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4821g00001 - - mtr:11433967 249.595