Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme482002g00001 TTTACAAAGAATTTGGACACAGCCAATACATTGATGAGAGGATTGAGGGCAGGAACGGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCATTTGGTGGGTACATGATGAGTGGTGTAGGAAGAGAGAAAGGTATCTATAGTCTTCATAATTACTTACAAGTTAAGGCTGTGGTTGCACCTCTTAAGAATCCCGCATGGTTGTAA 213 0.4038 FTKNLDTANTLMRGLRAGTVWINCFDVFDAAIPFGGYMMSGVGREKGIYSLHNYLQVKAVVAPLKNPAWL 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme482002g00001 70 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 60 IPR016162 GO:0016491
Trme482002g00001 70 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 31 IPR016163 GO:0016620
Trme482002g00001 70 Pfam Aldehyde dehydrogenase family 1 60 IPR015590 GO:0016491
Trme482002g00001 70 FunFam Aldehyde dehydrogenase, putative 32 58 - -
Trme482002g00001 70 SUPERFAMILY ALDH-like 1 67 IPR016161 GO:0016491
Trme482002g00001 70 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme482002g00001 Trme-Chr482002 2 214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme482002g00001 1 70 Aldehyde Dehydrogenase Gene Family AT3G48000 78.571 3.75e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme482002g00001 K00128 - tcc:18603880 139.043