Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme481234g00001 ATAGTGATTGGAAGTAGTAGCAATAGTGAGTGCAATTTCCCTGCAGTCTTTAACTTTGGTGACTCAAACTCAGACACTGGTGGCTTGGCTGCTTCACTTCTACCACCAACACCACCATATGGAGAGACTTATTTCCACAGACCTGAAGGGAGGTTCTCTAATGGTCGTCTAGTCATTGATTTCATTGGTAATTATTAA 198 0.4192 IVIGSSSNSECNFPAVFNFGDSNSDTGGLAASLLPPTPPYGETYFHRPEGRFSNGRLVIDFIGNY 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme481234g00001 65 Pfam GDSL-like Lipase/Acylhydrolase 16 62 IPR001087 GO:0016788
Trme481234g00001 65 Gene3D SGNH hydrolase 3 65 IPR036514 -
Trme481234g00001 65 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 5 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme481234g00001 Trme-Chr481234 1 198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme481234g00001 2 63 Pollen Coat Proteome AT1G75930 37.879 1.73e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme481234g00001 - - tpra:123893080 130.954