Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48087g00001 GAAGGAATAGCTGTAGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGAAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCATTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCGGCTGTGAACTACAATGCTGGATGCAAGACTGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACACTGTTATTCTTGACACCTTTGTTCTATTACACTCCTCTGGTGGTACTATCAGCCATAATTGTATCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATCTGTGGAAGGTTGATAAATTCGATTTTGTCGTCTGCATTAGCGCATATATCGGTGTTGTTTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCGTACTTCGGTTACTGCTGTTTATTGCAAGACCAAGAACATTTGTTTTGGGAAACATTCCAAACTCTATAA 483 0.3954 EGIAVGRSFAMYKNYNIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYEAAIHLWKVDKFDFVVCISAYIGVVFGSVEIGLVIAYFGYCCLLQDQEHLFWETFQTL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48087g00001 160 PANTHER SULFATE TRANSPORTER 1 139 IPR001902 GO:0016020|GO:0055085
Trme48087g00001 160 Pfam Sulfate permease family 1 121 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48087g00001 Trme-Chr48087 273 962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48087g00001 1 138 Inorganic Solute Cotransporters AT4G02700 82.609 2.59e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48087g00001 K17471 - gmx:100810196 256.914