Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48076g00001 GAGGTTAAAGAAGATCTTAAAGTTGAAGAGGATTTTGAAAGTAAAAAGTGTAAACTTGCAGAGTTCGGAAATGCCTTGCTAACAGATCCAGAGTCCAATATTAAATTTCTGAAGGAAATGTTACAGATATCTAAAGACAATGATGACACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAGAGATATTATACCTGGCTATCGAATCAGGCTTCCTACTGAAAAGGAACAAGAAATGAAGGTTTCAAAGACCGTTAAAAAGATGCGTTTTTATGAATCAACTCTCCTCTCTGCATACAAGGCTTACTTGCAAAGGCTGATAGCCTTAGAAAAGAAGCCTTTATTTCAGCTTGTCGCAGTTCGTTGTATTTGTTCTTTGCTTGATTCAAATCCCCATTTCAACTTTCGTGAAACCTTGTTGGATGCTACTGTCAGAAACATAAGCTCCAGTAATGAGGCCATAAGGTGCAGTTTTATCTTTGCCACTGGCCATTATTGTATTAAGGTGTCTCGTGTATTTTATGGAATTTCCTATGAAACAACATAA 555 0.3694 EVKEDLKVEEDFESKKCKLAEFGNALLTDPESNIKFLKEMLQISKDNDDTIVKLGLLSLLAVFRDIIPGYRIRLPTEKEQEMKVSKTVKKMRFYESTLLSAYKAYLQRLIALEKKPLFQLVAVRCICSLLDSNPHFNFRETLLDATVRNISSSNEAIRCSFIFATGHYCIKVSRVFYGISYETT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48076g00001 184 Pfam Nucleolar complex-associated protein 15 105 IPR011501 -
Trme48076g00001 184 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 1 158 IPR016903 -
Trme48076g00001 184 SUPERFAMILY ARM repeat 10 170 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48076g00001 1 162 Core DNA Replication Machinery Family AT1G79150 65.455 5.39e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48076g00001 K14834 - gmx:100776136 276.944