Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48071g00001 ATGTTTGTGCATTTTACTTTTCAGAACATCATTGGTGCCGGAGGTGAAACAACATCGACTACCATAGTTTGGGCAATGGCTGAGTTGGTAAGGGATCTAAGAGTGATGAAGAAAGCACAATATGAGGTGAGAGAAATATTCGACAAGAAAGGAATTGTTGGTGAAAACAATATAAATGAACTAAAATATTTGAAATTAGTTGTGAAAGAGACTCTAAGGTTACACCCTCCAAGTTCTCTTTTACTTCCAAGAGAATGTGGACAAGCATGTGAGATTGATGGGTATCATATACCAGCCAAAAGTAAGGTGATGGTGAATGCATGGGCAATTGGAAGAGATCCAAAGTATTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTTACCGATAGTTCTATTGACTACAAAGGGACTAATTTTGAGTACATTCCTTTTGGTGCCGGAAGAAGAATATGTCCAGG 461 0.3861 MFVHFTFQNIIGAGGETTSTTIVWAMAELVRDLRVMKKAQYEVREIFDKKGIVGENNINELKYLKLVVKETLRLHPPSSLLLPRECGQACEIDGYHIPAKSKVMVNAWAIGRDPKYWTEPERFYPERFTDSSIDYKGTNFEYIPFGAGRRICPG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48071g00001 154 Gene3D Cytochrome P450 3 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PANTHER OS08G0105600 PROTEIN 10 154 - -
Trme48071g00001 154 PRINTS E-class P450 group I signature 65 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS E-class P450 group I signature 152 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS E-class P450 group I signature 106 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS E-class P450 group I signature 142 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS E-class P450 group I signature 22 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS E-class P450 group I signature 2 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 145 154 IPR017972 GO:0005506|GO:0016705
Trme48071g00001 154 SUPERFAMILY Cytochrome P450 5 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS P450 superfamily signature 13 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS P450 superfamily signature 66 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS P450 superfamily signature 152 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 PRINTS P450 superfamily signature 143 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme48071g00001 154 Pfam Cytochrome P450 8 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48071g00001 Trme-Chr48071 1 461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48071g00001 9 154 Cytochrome P450 AT3G26210 57.823 1.55e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48071g00001 - - gmx:100778040 241.506