Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme48003g00001 TATGGAGATATACATGCAGTAAATTTGAGGGAGATGATATTCATAATGATTTATGTTTCATTTGATATGGTTCTTGGTGCTTACTTGATCGGTAACATGACAGCCTTGATAGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAGGATGACAGATCTGATGAAATATATGAATAGAAATAAACTTGGTAGGGATATCCGTGAACAAATAAGGGGCCACGTGCGCCTGCAATTTGAGAGCAGCTACACTGATGCTTCTGTCCTTAAGGACATTCCCATTTCTATTCGATCTAAGATATCCCAATCATTGTATTTGCCATACATTGAGAAAGTCTCTCTTTTTAGAGGATGCTCTTCAGAATTCATCAATCAGATTTTCTCCTTTGCTTTTTGGTCTTGA 399 0.3734 YGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLMKYMNRNKLGRDIREQIRGHVRLQFESSYTDASVLKDIPISIRSKISQSLYLPYIEKVSLFRGCSSEFINQIFSFAFWS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme48003g00001 132 Gene3D Helix hairpin bin 41 102 - -
Trme48003g00001 132 SUPERFAMILY Voltage-gated potassium channels 1 38 - -
Trme48003g00001 132 SUPERFAMILY cAMP-binding domain-like 41 128 IPR018490 -
Trme48003g00001 132 PANTHER POTASSIUM CHANNEL AKT1 1 126 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme48003g00001 Trme-Chr48003 348 929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme48003g00001 1 125 Ion Channels AT3G02850 81.600 1.37e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme48003g00001 K21867 - cit:102609709 233.032