Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme479732g00001 GGTGCCGACGCTTCAGATCCTAAGGCATACATAGCGGCTGCAGTGAAAGCAGCCACTGACACTGTCATTAGGGCATTTAACATGAGTGATAGACTCACCATTGAGTACGGCGACAAGGATAGGCGCATCAAGATGGCTCTTGATGACTGCAAAGAGATGATGCAGTTTGCTTTGGACAGTCTTGATCTCTCCATCACTGTGGTTCGTGACAACAACATTCTATCTGTTCATGCTCAAAATGCTGATCTCAGGAATTGGTTGAGTGCAGTTATCTCTTACAAACA 284 0.4577 GADASDPKAYIAAAVKAATDTVIRAFNMSDRLTIEYGDKDRRIKMALDDCKEMMQFALDSLDLSITVVRDNNILSVHAQNADLRNWLSAVISYK 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme479732g00001 94 Pfam Plant invertase/pectin methylesterase inhibitor 5 93 IPR006501 GO:0004857
Trme479732g00001 94 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 94 IPR035513 -
Trme479732g00001 94 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 4 93 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme479732g00001 Trme-Chr479732 1 284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme479732g00001 1 94 Carbohydrate Esterase AT3G05610 34.043 4.22e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme479732g00001 K01051 - gmx:100815015 118.242