Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47914g00001 GTACTGAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGAATTACTGGATTGAACCCGATGTTTCATGTGATGCCTGATATATCATCAATGGGCATGCCATCATTTGATGGAAGCCCTTCAGACAATTCAGCTGATGCGGCTGTTCCTGTGCAAGACGATCCACATCATCACTTCTATCAACCCGCATCTAATAATCCTATGCCGTGTCATGATATGAGAGTCAACAATGGGTTGGGAGACATTTCTTCAATTGAAAATGTACAGCAGAATAATGCAGCAGCAGTTGTAGGTGGCAACAAGATGGGTCAAACAGCT 342 0.4298 VLKADVETLRAKVKMAEETVKRITGLNPMFHVMPDISSMGMPSFDGSPSDNSADAAVPVQDDPHHHFYQPASNNPMPCHDMRVNNGLGDISSIENVQQNNAAAVVGGNKMGQTA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47914g00001 114 PANTHER BASIC LEUCINE ZIPPER 63 1 113 - -
Trme47914g00001 114 MobiDBLite consensus disorder prediction 41 79 - -
Trme47914g00001 114 Pfam Basic leucine-zipper C terminal 8 114 IPR020983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47914g00001 Trme-Chr47914 95 975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47914g00001 1 71 bZIP Transcription Factor Family AT3G54620 47.887 3.25e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47914g00001 K25784 - gmx:100170702 195.282