Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47902g00001 CCTGAGAAGCGCAGCAGGTTGTGGCGTCATGAGGAAGTGTTTGATATATTAGCAAAGCGCAAGGGAACAGATGCTGTCAAGGGACTGGCTTTGGTGTTTCCAAAAAAAGATTGTCTGGAAACCAAAGCATTTGAGAATATGAATAAACTCAGATTGCTTCGCCTTGCTGGGGTGAAGCTTAAGGGAGATTTTCAATATCTTTCTAGAGATCTTAGGTGGTTGTATTGGCATGGATTTCCAGAAACCTACACACCTGCAGAGTTTCAGCAAGAAAGTCTAGTTGCCATTGAATTAAAATATAGTAAGCTCAAACAAATATGGAACAAGAGCCAGATGCTAGGGAAACTAGAGAATCTAAAAATTCTTGATCTTAGTCATTCTCTGGATTTGACTGAAACCCCAGATTTTACATACTTGCCTAATCTTGAAAAGCTAGTACTCAAA 444 0.3964 PEKRSRLWRHEEVFDILAKRKGTDAVKGLALVFPKKDCLETKAFENMNKLRLLRLAGVKLKGDFQYLSRDLRWLYWHGFPETYTPAEFQQESLVAIELKYSKLKQIWNKSQMLGKLENLKILDLSHSLDLTETPDFTYLPNLEKLVLK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47902g00001 148 SUPERFAMILY L domain-like 29 147 - -
Trme47902g00001 148 Gene3D Ribonuclease Inhibitor 23 148 IPR032675 -
Trme47902g00001 148 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 147 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47902g00001 Trme-Chr47902 1 925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47902g00001 1 148 WRKY Transcription Factor Family AT4G12020 32.335 2.59e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47902g00001 - - mtr:25491570 256.144