Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47896g00001 ATGCATTGGAGTCTGTTCATCTTTTTCAACCATGACAATGGAAGAACACAGATAATTGATTTGTTTAACCAGGACAAGTATCTTAATGCAATCCAAACTAGTGCTCCACACCTTTTGCGATACTTGGCCACAGCGTTTATTGTCAACAAGCGCAGGAGACCTCAATTCAAAGATTTTATAAAAGTTATTCAACAAGAGCAGAATTCATATAAGGACCCCATCACCGAGTTTCTGGCCTGTGTTTATGTCAACTATGACTTTGATGGCGCACAAAAGAAGATGAGGGAGTGTGAAGAAGTAATTCTCAATGATCCCTTCCTTGGTAAACGAGTTGAAGAAAGCAACTTCTCAACTGTACCATTAAGGGACGAGTTTCTTGAAAATGCCAGGCTATTTATTTTTGAGACATACTGTAGAATACACCAACGCATTGACATGGG 440 0.3932 MHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47896g00001 147 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 146 IPR016650 GO:0003743|GO:0005737|GO:0005852
Trme47896g00001 147 ProSiteProfiles PCI domain profile. 7 147 IPR000717 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47896g00001 1 147 Eukaryotic Initiation Factors Gene Family AT3G57290 90.476 2.07e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47896g00001 K03250 - gmx:100788418 303.908