Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47827g00001 GCTCATTTTGCTCAAATCCGTGCCCCTGGTGGATTGGCACCGTTGGCTGGAGCAATTCCTGGATACCATCCAGGAGCACCGAGACTTGCCCCTCAGCAACTGTATTTTGGTCAAGGCACTCCTGGTTTCATACCACCTCAGCCTGCTGGATTTGGTTTCCAGCAACAAATTTTGCCTGGAATGCGGCCCGGTGTTGCTCCAAATTTTGTCATGCCATATCAACTTCAAAGACAGGGCCAAAATGGGCAAAGGATAGGTGCTCGTCGAAATGGAAATCTCCAACACGTGCATCAGAACCAAATGATGCATCGTAACTCCAATCAAGGTTTTAGATACATGGCTAACAATCGAAATGGCATGGATCCATCTGGAGTTCCTCAAGGTCTAGCTGGTCCAATGTTGCCTATGACATTTGATGGTTCTGGAGTTACTGCACCTATTGATAATCAGCGTCCAGGGTCTACATCACTTGCCTCAGCTTTAGCTTCTGCAACTCCAGAAAACCAGCGCATGCCTTTTACTTAA 525 0.4762 AHFAQIRAPGGLAPLAGAIPGYHPGAPRLAPQQLYFGQGTPGFIPPQPAGFGFQQQILPGMRPGVAPNFVMPYQLQRQGQNGQRIGARRNGNLQHVHQNQMMHRNSNQGFRYMANNRNGMDPSGVPQGLAGPMLPMTFDGSGVTAPIDNQRPGSTSLASALASATPENQRMPFT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47827g00001 174 MobiDBLite consensus disorder prediction 143 174 - -
Trme47827g00001 174 MobiDBLite consensus disorder prediction 142 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47827g00001 Trme-Chr47827 215 929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47827g00001 1 169 Eukaryotic Initiation Factors Gene Family AT1G22760 45.506 2.69e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47827g00001 K13126 - gmx:100783163 268.47