Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47803g00001 ATGTGGGCTGAATCTTTTTTGAAGTCGAGGAATAATACTTACCCTTTTACTGTTCCTTTGAAGGTTGTTGAAAAGAACAAGGTTGATGCTGCTCGGTTCTCCCCGTTTTGGAATGAGATTATAAGAAATCTAAGGGAGGAAGACTACATAACCAACTTTGAACTGGAGTTGCTTTTAATGCCTAGAAATTCTGGAGATATTCCTATGGTTCAGTGGCCACTCTTTCTACTTGCAAGCAAG 240 0.3958 MWAESFLKSRNNTYPFTVPLKVVEKNKVDAARFSPFWNEIIRNLREEDYITNFELELLLMPRNSGDIPMVQWPLFLLASK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47803g00001 80 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 23 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47803g00001 Trme-Chr47803 246 777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47803g00001 22 80 Cell Wall Biosynthesis AT3G07160 74.576 8.66e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47803g00001 K11000 - lja:Lj5g3v2296720.1 120.168