Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme476886g00001 TGGGGAGGCATTAAACGTAGCGGTTTTGGTCGCGAATTAGGAGAATGGGGACTTGATAACTACTTGAGTGTGAAGCAAGTTACGACGTACATATCTGGTGAGCAGTGGGGCTGGTATCAATCCCCTTCAAAGCTGTGA 138 0.4783 WGGIKRSGFGRELGEWGLDNYLSVKQVTTYISGEQWGWYQSPSKL 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme476886g00001 45 PANTHER ALDEHYDE DEHYDROGENASE 1 45 - -
Trme476886g00001 45 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 45 IPR016162 GO:0016491
Trme476886g00001 45 SUPERFAMILY ALDH-like 1 40 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme476886g00001 Trme-Chr476886 3 260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme476886g00001 1 45 Aldehyde Dehydrogenase Gene Family AT3G48170 84.444 9.69e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme476886g00001 K00130 - gmx:100170731 94.3597