Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme476436g00001 ATTCCTTACTGCATTGTTAAGGGCAAAGCACGTTTGGGAACTATTGTTCACAAGAAAACTGCTGCTGTTTTGTGCTTGACCACTGTCAAGAATGAAGACAAAATGGAATTCAGCAGAATCCTAGAAGCCATTAAG 135 0.4 IPYCIVKGKARLGTIVHKKTAAVLCLTTVKNEDKMEFSRILEAIK 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme476436g00001 45 Gene3D - 1 45 IPR029064 -
Trme476436g00001 45 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 1 36 IPR004038 -
Trme476436g00001 45 SUPERFAMILY L30e-like 1 44 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme476436g00001 Trme-Chr476436 69 285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme476436g00001 1 45 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 82.222 8.09e-23 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme476436g00001 K02936 - gmx:100819609 90.8929