Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47580g00001 GCTTATCCGTCTGTTGTGGATTCTTCTGGTTGTATCTTTGGTAAGCAAGGTACATTTTACAAGGAACTTGATTTTGCTAATGTATTGAATTGTGAGAGGAGGCCTACCATTATTGATCTTCCTCCTANNNNNNNNNNAGACACCGATATTGGGAAAATTCCTTCTTGTTGCCGGAACGGTACTATATTGCCACCATCCATGGATCCAAGTAAATCTGTTTCGAGATTCCAAATGCAGGTGTTCAAAATGCCGCCAATGCTTAACCGGTCCGAGCTTTCTCCGCCGCAAAACTGGAAGATTAGTGGATCGCTTAACCCCGACTACAAATGCGGTCCTCCAGTTCGTGTTAGCCCTACTGAGAATCCAGATTCTAGCGGGTTGCCATTAAACAAAACTGTAATGGCAAGCTGGCAGGTTGTGTGTAACATAACAACAGCCAAGGGAACATCAAATAAATGCTGTGTCTCGTTTTCAGCTTTTTACAATGAATCAGTTATTCCATGCAAAACATGTGCATGTGGATGCCCCAAGAATGTGTCAAGAACATGTAATACTACTGCACCTGCTATGTGGCTTCCCCCACAGGCACTCCTTGTTCCTTTCGAGAACCGAACTGCTCAGGCTGTTGCGTGGGCTATTCTGAAACATCTACCAGTGCCAAAACCAATGCCCTGCAGTGACAATTGTGATACTGGTTTGCTGCTGTCCAAATGGACAAAGCTGCTGCAGGTTTTGAGAAAATGTATTCATTCAAGGCAAGTGTCATAG 768 0.4375 AYPSVVDSSGCIFGKQGTFYKELDFANVLNCERRPTIIDLPPXXXXDTDIGKIPSCCRNGTILPPSMDPSKSVSRFQMQVFKMPPMLNRSELSPPQNWKISGSLNPDYKCGPPVRVSPTENPDSSGLPLNKTVMASWQVVCNITTAKGTSNKCCVSFSAFYNESVIPCKTCACGCPKNVSRTCNTTAPAMWLPPQALLVPFENRTAQAVAWAILKHLPVPKPMPCSDNCDTGLLLSKWTKLLQVLRKCIHSRQVS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47580g00001 255 PANTHER COBRA-LIKE PROTEIN 7 1 231 - -
Trme47580g00001 255 Pfam COBRA-like protein 6 144 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47580g00001 Trme-Chr47580 76 934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47580g00001 1 233 COBRA Gene Family AT4G16120 67.094 1.06e-109 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47580g00001 - - gmx:100814396 421.394