Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47562g00001 ATGATTTGGTGTTGCCAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAATTGAAAGGGAACCATCTTGCGAGCCCATTACACAAATGGAGTTTGAATTTGAAAAGAGAAGAGTAACAAAGGGAGAAATCCGAGACTTGATTTTCCATGAGATTCTAGAGTACCATCCTCAACTAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTTGACAAGCAGTTCACTCATCTTGAGGAAACTGGTGGTAAAAGTGATCCCGTTGTGCCACTTGAAAGAAAACATGCATCGCTTCCCAG 317 0.4069 MIWCCQALADPYFKGLAKIEREPSCEPITQMEFEFEKRRVTKGEIRDLIFHEILEYHPQLNGTERTNFLYPSAVDQFDKQFTHLEETGGKSDPVVPLERKHASLP 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47562g00001 105 Gene3D Transferase(Phosphotransferase) domain 1 6 36 - -
Trme47562g00001 105 Gene3D Phosphorylase Kinase; domain 1 37 59 - -
Trme47562g00001 105 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47562g00001 Trme-Chr47562 413 840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47562g00001 6 105 MAP Kinase Gene Family AT2G42880 72.381 3.17e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47562g00001 - - tpra:123882256 207.608