Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47380g00001 CTTTGTTCCCAATCTATTTTGGACAGTGCTGTAGACCTTTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGAAAAGGAGGAACTGTTGCTCCACCTGAGAGGCAACACGCATCTTCATTGCCTAGAGCATGTGTGTTGTATTCTGATAACACGATGCATAATACGGCTGAGGTTGCAGACGATCTATCCAAATGTTGCATAAAAGAAGTTGAGCAACAACCTGTAGATAGGAGCAGTGCTATTCTTCCGATGACTCGGCTTCCTTTACAAGCTCCTCAAAATATGCAAGGTCTTGCTGCAAGGCCTGGGAAAGTTGTTGGTTCTGCAATGCGTTACAACAACTGTGGGGTAGCAGTGGTGGCAGAAACCGAACAGCGGAGGGTGGTTAGGAATCCATCTGTTACGGCTCAATACGCTGCTTCGAACGGTTCGTATCCGAGGAGAAATCCAAACTATAAAAATGAGAGGGCAGATGATGATGGGATTGAAGGTTCTAATGGGCTTCAGCCAAAACCTCAATACATAGCAAGAAAAGTTGCTGCTGCTCAAGGCGGAGCAGGTGGCCAGTGGTATTGA 582 0.4588 LCSQSILDSAVDLFKKQFAYLEEHYGKGGTVAPPERQHASSLPRACVLYSDNTMHNTAEVADDLSKCCIKEVEQQPVDRSSAILPMTRLPLQAPQNMQGLAARPGKVVGSAMRYNNCGVAVVAETEQRRVVRNPSVTAQYAASNGSYPRRNPNYKNERADDDGIEGSNGLQPKPQYIARKVAAAQGGAGGQWY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47380g00001 193 MobiDBLite consensus disorder prediction 140 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47380g00001 Trme-Chr47380 1 818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47380g00001 9 193 MAP Kinase Gene Family AT5G19010 51.531 2.42e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47380g00001 - - gmx:100781957 286.189