Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47340g00001 GTCTTAAAAACTCCTGTATCACTGGACATGCTTGGCCGGATATTTAACGGTTCTGGAAAACCAATTGATAATGGTCCACCAATTTTACCCGAGGCTTACTTGGATATATCAGGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANATTATTCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCTGAGGAGATGATACAGACAGGAATATCTACAATTGACGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCTCTATTTTCAGCCGCCGGTCTCCCCCATAATGAAATTGCTGCACAGATTTGTCGTCAGGCTGGCTTAGTCAAGCGATTAGAGAAGTCTGATAATCTTCTTGAGGTATAG 426 0.3333 VLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47340g00001 141 Gene3D - 62 138 - -
Trme47340g00001 141 Gene3D - 1 46 - -
Trme47340g00001 141 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 39 IPR022879 -
Trme47340g00001 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 126 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47340g00001 Trme-Chr47340 335 760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47340g00001 1 140 Primary Pumps ATPases(2) AT4G38510 76.429 5.76e-65 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47340g00001 K02147 - gmx:100814088 196.438