Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme473353g00001 TCGACTTCTGGTGGCGGTGGAGGGACTCAAAGTACGAGAGAAGAGCAAGAAGATGTTTCGAATCCGAGTGGTGGTGGGTCGAGTAAGAAGAGACATAGAACAAAGTTCACACCAGAGCAGAAAGATAAGATGTTGGAGTTAGCTGAGAAATTGGGTTGGAGAATTCAGAAACATGATGAAGGTTTGGTTCAAGATTTTTGCAATGAAAGTGGTGTTAAGCGTCATGTTCTTAAGGTTTGGATGCATAACAACAAACACACTCTTGGTAAGAAGCCCTAG 279 0.4301 STSGGGGGTQSTREEQEDVSNPSGGGSSKKRHRTKFTPEQKDKMLELAEKLGWRIQKHDEGLVQDFCNESGVKRHVLKVWMHNNKHTLGKKP 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme473353g00001 92 MobiDBLite consensus disorder prediction 1 42 - -
Trme473353g00001 92 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 19 88 - -
Trme473353g00001 92 Gene3D - 11 90 - -
Trme473353g00001 92 NCBIfam homeobox domain, ZF-HD class 29 85 IPR006455 -
Trme473353g00001 92 MobiDBLite consensus disorder prediction 1 27 - -
Trme473353g00001 92 SUPERFAMILY Homeodomain-like 18 90 IPR009057 -
Trme473353g00001 92 FunFam Zinc-finger homeodomain protein 2 14 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme473353g00001 Trme-Chr473353 1 279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme473353g00001 15 88 ZF-HD Transcription Factor Family AT4G24660 64.865 4.10e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme473353g00001 - - gmx:100808910 150.984