Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47316g00001 ATGATTGAACCTATTTGCAATCTTTTCGCTGCTCTTTTCCTTTCCAGCATTGGAATGCTGATTCATGTTCATTTTCTTTGGAACCATGTTGATATTTTGGTAGCATCAGTTATTTTAGTGATTGTTATAAAAACAATCATAATTGCTTCGGTTGTGAAAGGATTTGGTTATAATAACAAGACTTCAGTACTTGTAGGAATGTCCATGGCACAAATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCAAATCTTCATCTAGTTGAGGGTAAACTATATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTG 315 0.3651 MIEPICNLFAALFLSSIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47316g00001 105 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 2 105 IPR045158 GO:0015386|GO:0071805|GO:1902600
Trme47316g00001 105 Gene3D - 1 105 IPR038770 -
Trme47316g00001 105 Pfam Sodium/hydrogen exchanger family 2 105 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47316g00001 Trme-Chr47316 62 897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47316g00001 1 105 Antiporters AT5G51710 80.000 9.42e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47316g00001 K26735 - lja:Lj5g3v0391170.1 140.198