Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme473116g00001 TGTGTCTTCCCTGAGCTCTTGTCCCGCAATGGTGTCAAATTCGGCGAGGCTGTGTGGTTCAAGGCAGGATCCCAAATCTTCAGTGAAGGTGGACTTGACTACTTGGGTAACCCAAGCCTAGTCCATGCACAAAGTATCCTTGCAATTTGGGCTGTCCAAGTTATCTTAATGGGAGCTGTTAAGGGTTACCGTATTGCTGGGGGACCTCTCGGTGAAGTTGTCGACCCACTCTATCCAGGTGGCAGCTTTGACCCATTAGGCCTAGCTGACGACCCAGAGGCTTTCG 286 0.5175 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVKGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme473116g00001 95 Pfam Chlorophyll A-B binding protein 1 94 IPR022796 -
Trme473116g00001 95 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 95 IPR001344 GO:0009765|GO:0016020
Trme473116g00001 95 SUPERFAMILY Chlorophyll a-b binding protein 1 95 - -
Trme473116g00001 95 Gene3D Chlorophyll a/b binding protein domain 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme473116g00001 Trme-Chr473116 2 287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme473116g00001 1 95 Chloroplast and Mitochondria Gene Families AT1G29910 89.583 2.43e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme473116g00001 K08912 - osa:4324599 194.126