Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47291g00001 ATGTCTTTGTGGATCATTGTCTTTGCTACAATTGCAGCTGCTATTCTCATAAACCGACTTCTAAACCTCATNNNNNNTNNNNNNNNNNTNNNNNNNNNNGGGCCAAGCCCATGGCCCATCGTCGGAAACCTACCTCACATGGGCCCAGTCCCACATCACGCCCTAGCCGCCTTAGCCCTAAAACACGGCCCTCTCATGCATCTTCGATTAGGTTTTGTAGACGTAATCGTGGCCGCCTCCGCCTCAGTGGCCGAACAATTCTTAAAAGTTCATGATGCTAATTTCTCTAGCCGGCCGCCTAACTCCGGCGCTAAATATATAGCTTATAATTATCAAGATCTTGTTTTTGCTCCCTATGGACCACGGTGGCGGTTATTAAGGAAAATTGCTTACGTTCACATGTTCTCTTCTAAGGCTTTGGATGATTTTAGACACATACGTCAG 444 0.4392 MSLWIIVFATIAAAILINRLLNLXXXXXXXXXXGPSPWPIVGNLPHMGPVPHHALAALALKHGPLMHLRLGFVDVIVAASASVAEQFLKVHDANFSSRPPNSGAKYIAYNYQDLVFAPYGPRWRLLRKIAYVHMFSSKALDDFRHIRQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47291g00001 148 SUPERFAMILY Cytochrome P450 34 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme47291g00001 148 PANTHER CYTOCHROME P450 FAMILY 1 7 148 - -
Trme47291g00001 148 Gene3D Cytochrome P450 29 148 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme47291g00001 148 Pfam Cytochrome P450 34 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47291g00001 Trme-Chr47291 393 836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47291g00001 34 148 Cytochrome P450 AT5G07990 75.652 5.57e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47291g00001 K05280 - gmx:547475 208.764