Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47286g00001 GATGATACAGGGAAAGGAATTCCTAAAGAGAATCATAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGTCAAGTTGGAACTGGCTTAGGACTTGGGATTGTGCAATCATTGGTCTCTGATTCGATTCCATCTGGTGCCAATTTCGGTGGGCTAGTCCATACAGAGCAAAAAATACTCTAG 195 0.4 DDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVSDSIPSGANFGGLVHTEQKIL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47286g00001 64 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 44 IPR036890 -
Trme47286g00001 64 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2 44 IPR003594 -
Trme47286g00001 64 Gene3D - 1 61 IPR036890 -
Trme47286g00001 64 PANTHER TWO-COMPONENT HISTIDINE KINASE 2 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47286g00001 Trme-Chr47286 186 508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47286g00001 1 43 Histidine Kinase Gene Family AT2G47430 79.070 1.14e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47286g00001 - - mtr:11417449 89.3521