Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme472347g00001 TCTGGAATTCCTCCTGCTCCTAGGGGTGTTCCTCAGATCAATGTCTGCTTTGACATTGATGCTAATGGTATTTTGAATGTCTCAGCAGAGGATAAGACTACAGGCCAGAAGAACAAGATCACAATTACTAATGACAAGGGTAGGCTCTCAAAGGAGGAGATTGAGAAGATGGTACAAGAAGCTGAGAAGTACAAATCTGAGGATGAGGAACACAAGAAGAAGGTGGAGGCCAAAAATGCTCTTGAGAACTATGCGTATAACATGAGGAACACAATCAAGGATGACAA 287 0.4251 SGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDD 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme472347g00001 95 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 95 IPR029047 -
Trme472347g00001 95 PANTHER HEAT SHOCK PROTEIN 70KDA 1 93 IPR013126 GO:0005524|GO:0140662
Trme472347g00001 95 FunFam Protein CBG18239 21 77 - -
Trme472347g00001 95 Pfam Hsp70 protein 2 94 IPR013126 GO:0005524|GO:0140662
Trme472347g00001 95 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 82 IPR029047 -
Trme472347g00001 95 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme472347g00001 Trme-Chr472347 2 288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme472347g00001 1 95 Calmodulin-binding Proteins AT3G12580 95.789 3.93e-59 189