Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme471870g00001 ATGATTCTCGCACAGATGCGAGAGATTGCAGGGGCATTTTTGGAATCACCTGTTAAGAATGCAGTGATTACTGTACCTGCTTATTTCAATGATTCACAACGACGAGCCACAAAAGATGCGGGTGATATTGCTGGTCTCAATGTAATACGGATAATCAATGAACCAACAGCGGCAGCTCTTGCATATGGCCTTCAAAAAAGAGCTAATTGTGTTGAAGAGAGAAA 224 0.4196 MILAQMREIAGAFLESPVKNAVITVPAYFNDSQRRATKDAGDIAGLNVIRIINEPTAAALAYGLQKRANCVEER 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme471870g00001 74 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Trme471870g00001 74 Gene3D - 1 73 - -
Trme471870g00001 74 FunFam Endoplasmic reticulum chaperone BiP 1 73 - -
Trme471870g00001 74 PANTHER HEAT SHOCK PROTEIN 70KDA 1 66 IPR013126 GO:0005524|GO:0140662
Trme471870g00001 74 Pfam Hsp70 protein 1 68 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme471870g00001 Trme-Chr471870 1 224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme471870g00001 1 74 Calmodulin-binding Proteins AT3G12580 77.027 1.10e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme471870g00001 K03283 - psat:127128253 140.969