Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme47072g00001 ATGCTTATTTTAAGCAAGCTAGAGAAATGTTTAGCTTATTATACTGATGATGACAGTTATAGGCCTTCTAAAAGGGCCAGAGCTGATCACAGGTCTTCTGTACCGAGCGATGATGATCTTGATGGGATGAATAGTTCACCTGGAAGGTCACCAAGAAGACACTCAAGGGAGGATAATCCAACTACTGATCAAAATGATGATGATCAATATGAGGATGATTTTGATGATGAAGCTGGGTATGAGATGTACCGTGTTCAAGGAACTCTTAGAGAATGGGTTACAAGAGATGAAGTGCGCCGATTCATAGCCAGAAAGTTCAAAGATTTCTTACTCACTTATGTCAATCCAAAGAATGAACATGGAGACTTTGAATATGTGCGTCTGATAAATGAAATGGTGTCAGCTAACAAGTGCAGTTTGGAGATAGATTACAAGCAATTTATCTACGTCCATCCCAACATTGCCATTTGGCTGGCTGATGCACCTCATTCTGTTTTAGAAGTTATGGAAGATGTTGCTAAAAGCGTTGTCTTTCAATTACATCCAAATTACAAACATATACATCAAAAGATTTATGTGCGCATTACCAACTTACCAGTTTATGATCAGATTCGAAATATTAG 623 0.3804 MLILSKLEKCLAYYTDDDSYRPSKRARADHRSSVPSDDDLDGMNSSPGRSPRRHSREDNPTTDQNDDDQYEDDFDDEAGYEMYRVQGTLREWVTRDEVRRFIARKFKDFLLTYVNPKNEHGDFEYVRLINEMVSANKCSLEIDYKQFIYVHPNIAIWLADAPHSVLEVMEDVAKSVVFQLHPNYKHIHQKIYVRITNLPVYDQIRNI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme47072g00001 207 Gene3D - 96 200 - -
Trme47072g00001 207 MobiDBLite consensus disorder prediction 19 73 - -
Trme47072g00001 207 FunFam DNA helicase 96 200 - -
Trme47072g00001 207 Pfam MCM N-terminal domain 104 197 IPR027925 -
Trme47072g00001 207 MobiDBLite consensus disorder prediction 19 37 - -
Trme47072g00001 207 SUPERFAMILY Nucleic acid-binding proteins 105 207 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme47072g00001 Trme-Chr47072 69 949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme47072g00001 11 207 Core DNA Replication Machinery Family AT1G44900 69.543 1.76e-77 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme47072g00001 K02540 - qsu:111999780 318.546