Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4704g00001 AAGCTAAAAGGACCTGGCATACCGACTACCATTCTAAGATGTGCTCCTGACAGCTGTGATGTATATGTTGTTGATAGAGATAGAATTGTATCAAAGTTAGCTGATTCTTCATCTTCACATTCTCATGAGGAAGGCCCAAGGTACATCGTGTCTAATCACGTAAATAAATCAGACAACGGTGCTGGCGTTGGTGGACAAATGTCTGGAATCAGTGCATCCTCAACAGAACTTAAAATGCTAAAAAATTTCAGATTTCTATCAATATCAGAGCGTAGTTACATTGGTCTTCAAACCTCTAGTCGTAGGAATTCTTTTGAAAATTCTACTATAAGTGAAGAAGCAAATCCAGAAAACTATGGAGACTATGTTGATTCCATCAGTCTCCACTCATTTGATTCCATTGCTTCTGCTCATCATGAACCGTTAGACGTGCAAGAAGTAGAACGGTTGCAACTGGAGTTACAGAATACGATTGCCATGTACAGACAGGTTTGTGAAGAACTGGTTCATGCTCAAAGCAAGGCCCTTTTACTTTCTTCTGAATCTCTCGAAGAAACTAAAATAATAAATGCTTCCTTGAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGAAGAGAAAGCAAAGTATTTAAAAGTCATGAAGGAACTTGAGGAGTCGAAAAGTATATTTGCCAAAGAATCATATGAAAGGCAAATGGCCGAACTTAATGTCCTTAGAGAATCCATTGAAAAACAGAGAATTGTCGACACATTACTCTCAAATGACAGGAGATACAGAAAGTATACCATGGATGAAATCAAGATCGCGACAAACAACTTGTCTGAGGCCTTGGTAATTGGTGAAGGAGGATATGGGAAAGTTTATAAGTGCAATCTTGATCACACACCAGTAGCTGTAAAGGTTTTGCATCAGGACACAATCAACAAGAAA 933 0.3859 KLKGPGIPTTILRCAPDSCDVYVVDRDRIVSKLADSSSSHSHEEGPRYIVSNHVNKSDNGAGVGGQMSGISASSTELKMLKNFRFLSISERSYIGLQTSSRRNSFENSTISEEANPENYGDYVDSISLHSFDSIASAHHEPLDVQEVERLQLELQNTIAMYRQVCEELVHAQSKALLLSSESLEETKIINASLKREETLRKIAAEEKAKYLKVMKELEESKSIFAKESYERQMAELNVLRESIEKQRIVDTLLSNDRRYRKYTMDEIKIATNNLSEALVIGEGGYGKVYKCNLDHTPVAVKVLHQDTINKK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4704g00001 311 Coils Coil 147 167 - -
Trme4704g00001 311 Coils Coil 200 220 - -
Trme4704g00001 311 Gene3D Phosphorylase Kinase; domain 1 253 311 - -
Trme4704g00001 311 Coils Coil 226 246 - -
Trme4704g00001 311 ProSitePatterns Protein kinases ATP-binding region signature. 280 301 IPR017441 GO:0005524
Trme4704g00001 311 PANTHER OS02G0152300 PROTEIN 7 307 - -
Trme4704g00001 311 SUPERFAMILY Protein kinase-like (PK-like) 257 307 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4704g00001 Trme-Chr4704 1 1684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4704g00001 3 311 Plant U-box Gene Family AT5G57035 43.030 6.80e-68 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4704g00001 - - gmx:100805896 469.929