Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46994g00001 ATGCATGATTTGATTAGAGACATGGGAAGAGAAATTGTTCGCAAAAGTGCCATAGAAGAACCTGGGAAGCGTAGTCGATTGTGGTTTCATGACGACGTAGATGATGTTTTGACAAAATATACTGGAACAGAAACTGTAAAGGGATTGGTTTTGAAGTCGCAAGGAACTGGCAGAGTTTCCTTCAGTACTAATTCTTTCAAGGAGATGAAGAAACTCAGACTTCTACAACTTGATTGTGTTGACCTCACTGGAGATTATGGGAACCTTTCTAAAGAACTGAAATGGGTCCATTGGCAAGGATTTACCTGCAACTTTATACCTGATGACTTTCATCAAGGAAATCTAGTTGTGTTTGAATTAAAACACAGCAATATTAAACAAGTATGGAATGAAACCAAGGTGCTGGTGAATCTAAAAATTCTCAATCTCAGTCATTCAAGATACTTGAAAAGCACCCCAGACTTTTCAAAATTGCCATATCTTGAAAAGCTCATTATGAAGGATTGTCCAT 511 0.3757 MHDLIRDMGREIVRKSAIEEPGKRSRLWFHDDVDDVLTKYTGTETVKGLVLKSQGTGRVSFSTNSFKEMKKLRLLQLDCVDLTGDYGNLSKELKWVHWQGFTCNFIPDDFHQGNLVVFELKHSNIKQVWNETKVLVNLKILNLSHSRYLKSTPDFSKLPYLEKLIMKDCP 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46994g00001 170 Gene3D Ribonuclease Inhibitor 13 170 IPR032675 -
Trme46994g00001 170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 169 IPR044974 GO:0006952
Trme46994g00001 170 SUPERFAMILY L domain-like 15 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46994g00001 Trme-Chr46994 12 848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46994g00001 1 169 WRKY Transcription Factor Family AT4G12020 31.351 3.22e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46994g00001 - - tpra:123923837 338.576