Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46990g00001 ATGCCTTCAGATGTTGTTGGAACAGTACGCACATTGGAGCGCGACTCTAATGTCTGCTCTGTTGCAAGAGCTGGAGATAACGTAGCTGTAACGTTGCATGGTGTTGATGGAAGTCATGTATTTTCTGGAGGCGTATTATGTCATCCTGACTTTCCTGTTGCAATTGCAAAGCATTTGGAGTTGAAATTGCTTGTCTTGGATGGTGCAAGTCCCATATTGGTCGGCGCCCAGTTAGAGTTTCATATACATCATGCAAAGGAACCTGCTAGAGTTTCAAAAATATTGTCAGTACTTGATCCCAAGACTGGTAAGGTGACCAAAAAGTCCCCTCGCTGTCTCACGTCAAAACAAAGTGCAGTAATTGAGGTGATTTTGCATGAGCCAGTCTGTGTGGTAGAGTTTTCTAGATGTAAAGCTCTTGGAAGAGTATCCCTTAGATCATTAGGAAGAACAATTGCAGTTGGACTTGTGACAAGAATAATC 483 0.4286 MPSDVVGTVRTLERDSNVCSVARAGDNVAVTLHGVDGSHVFSGGVLCHPDFPVAIAKHLELKLLVLDGASPILVGAQLEFHIHHAKEPARVSKILSVLDPKTGKVTKKSPRCLTSKQSAVIEVILHEPVCVVEFSRCKALGRVSLRSLGRTIAVGLVTRII 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46990g00001 161 CDD HBS1_C_III 52 160 - -
Trme46990g00001 161 FunFam elongation factor 1-alpha isoform X4 55 161 - -
Trme46990g00001 161 SUPERFAMILY Translation proteins 1 85 IPR009000 -
Trme46990g00001 161 Gene3D Translation factors 55 161 - -
Trme46990g00001 161 Pfam Elongation factor Tu C-terminal domain 58 160 IPR004160 -
Trme46990g00001 161 Gene3D Translation factors 1 51 - -
Trme46990g00001 161 PANTHER TRANSLATION FACTOR 1 160 - -
Trme46990g00001 161 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 57 160 IPR009001 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46990g00001 1 161 Eukaryotic Initiation Factors Gene Family AT5G10630 66.460 1.43e-73 231